Environmental DNA (eDNA) is a potentially powerful tool for detection and monitoring of rare species, including threatened native species and recently arrived invasive species. Here, we develop DNA primers for a suite of nine sympatric freshwater turtles, and use it to test whether turtle eDNA can be successfully detected in samples from aquaria and an outdoor pond. We also conduct a cost comparison between eDNA detection and detection through traditional survey methods, using data from field surveys at two sites in our target area. We find that eDNA from turtles can be detected using both conventional polymerase chain reaction (PCR) and quantitative PCR (qPCR), and that the cost of detection through traditional survey methods is 2–10X higher than eDNA detection for the species in our study range. We summarize necessary future steps for application of eDNA surveys to turtle monitoring and conservation and propose specific cases in which the application of eDNA could further the conservation of threatened turtle species.

From butterflies to elephants, the rapidly developing science of movement ecology is providing increasingly detailed spatio-temporal data on a wide array of mobile animals. Thus, this discipline also holds great promise for improving the conservation of wildlife. To measure progress toward this promise, we investigated the degree to which movement ecology research is connected to conservation goals as well as the proportion of studies that were incorporated into federal and international status assessments for mobile species at risk. We examined 13,349 "movement ecology" papers published between 1990 and 2014 and found that explicit connections to conservation and management were made in 35% (n = 4, 672) of these papers, with the number of connections increasing over time. We then measured the uptake of movement ecology research into species status assessment and recovery plans (n = 72 documents) produced by three different governance agencies for 12 endangered mobile species. We found that on average 60% of available movement ecology research was used in the status assessment process, demonstrating that when movement ecology research is available, it is generally being utilized in conservation planning. However, for 25% of these species, there was little movement research available to be used, highlighting that knowledge gaps remain for some at-risk species despite the general growth of movement ecology research. We outline opportunities for movement ecology to promote more effective conservation of taxa that move.

From birds to bacteria, airborne organisms face substantial anthropogenic impacts. The airspace provides essential habitat for thousands of species, some of which spend most of their lives airborne. Despite recent calls to protect the airspace, it continues to be treated as secondary to terrestrial and aquatic habitats in policy and research. Aeroconservation integrates recent advances in aeroecology and habitat connectivity, and recognizes aerial habitats and threats as analogous to their terrestrial and aquatic counterparts. Aerial habitats are poorly represented in the ecological literature and are largely absent from environmental policy, hindering protection of aerial biodiversity. Here, we provide a framework for defining aerial habitats to advance the study of aeroconservation and the protection of the airspace in environmental policy. We illustrate how current habitat definitions explicitly disadvantage aerial species relative to non-aerial species, and review key areas of conflict between aeroconservation and human use of the airspace. Finally, we identify opportunities for research to fill critical knowledge gaps for aeroconservation. For example, aerial habitat fragmentation may impact biodiversity and ecosystem function similarly to terrestrial habitat fragmentation, and we illustrate how this can be investigated by extending existing methods and paradigms from terrestrial conservation biology up into the airspace.

Adult sex ratio is a crucial parameter in population dynamics, with environmental sex determination being of particularly high theoretical and conservation interest. Monitoring hatchling sex ratio over time and space and understanding its variation may prove essential for effective conservation of populations of species with temperature-dependent sex determination. We used clutch incubation duration to estimate sex ratio of hatchlings produced on Zakynthos (Greece), the largest rookery of loggerhead sea turtles Caretta caretta (a species with temperature-dependent sex determination: colder temperatures producing more males) in the Mediterranean. We also explored spatial variation in hatchling sex ratio estimates within this nesting area. The estimated hatchling sex ratio on Zakynthos was female-biased in 2002 and 2003 (68 and 75% females estimated, respectively). We found significant differences in incubation durations between the 6 nesting beaches of Zakynthos, which result in pronounced differences in estimated hatchling sex ratio. Little is known about the relationship between adult and hatchling sex ratio or about the minimum number of males needed in healthy sea turtle populations. With global climate change, however, particular attention should be paid to the protection of the beaches that are apparently characterised by comparatively cold incubation temperatures to provide females with a variety of incubation environments.

Bats are important reservoir hosts for emerging viruses, including coronaviruses that cause diseases in people. Although there have been several studies on the pathogenesis of coronaviruses in humans and surrogate animals, there is little information on the interactions of these viruses with their natural bat hosts. We detected a coronavirus in the intestines of 53/174 hibernating little brown bats (Myotis lucifugus), as well as in the lungs of some of these individuals. Interestingly, the presence of the virus was not accompanied by overt inflammation. Viral RNA amplified from little brown bats in this study appeared to be from two distinct clades. The sequences in clade 1 were very similar to the archived sequence derived from little brown bats and the sequences from clade 2 were more closely related to the archived sequence from big brown bats. This suggests that two closely related coronaviruses may circulate in little brown bats. Sequence variation among coronavirus detected from individual bats suggested that infection occurred prior to hibernation, and that the virus persisted for up to 4 months of hibernation in the laboratory. Based on the sequence of its genome, the coronavirus was placed in the Alphacoronavirus genus, along with some human coronaviruses, bat viruses and the porcine epidemic diarrhoea virus. The detection and identification of an apparently persistent coronavirus in a local bat species creates opportunities to understand the dynamics of coronavirus circulation in bat populations.

Spillover of viruses from bats to other animals may be associated with increased contact between them, as well as increased shedding of viruses by bats. Here, we tested the prediction that little brown bats (Myotis lucifugus) co-infected with the M. lucifugus coronavirus (Myl-CoV) and with Pseudogymnoascus destructans (Pd), the fungus that causes bat white-nose syndrome (WNS), exhibit different disease severity, viral shedding and molecular responses than bats infected with only Myl-CoV or only P. destructans. We took advantage of the natural persistence of Myl-CoV in bats that were experimentally inoculated with P. destructans in a previous study. Here, we show that the intestines of virus-infected bats that were also infected with fungus contained on average 60-fold more viral RNA than bats with virus alone. Increased viral RNA in the intestines correlated with the severity of fungus-related pathology. Additionally, the intestines of bats infected with fungus exhibited different expression of mitogen-activated protein kinase pathway and cytokine related transcripts, irrespective of viral presence. Levels of coronavirus antibodies were also higher in fungal-infected bats. Our results suggest that the systemic effects of WNS may down-regulate anti-viral responses in bats persistently infected with M. lucifugus coronavirus and increase the potential of virus shedding.

lo studio analizza l'importanza degli agroecosistemi tradizionali, e in particolare degli oliveti, per la conservazione della chirotterofauna minacciata in un'isola grec

Wildlife diversity and abundance are declining globally and population reinforcement with captive‐reared animals is a common intervention used to prevent extinctions. Released captive‐reared individuals may undergo an acclimation period before their behavior and success is comparable to wild‐reared individuals because they lack experience with predators, complex habitats and variable environmental conditions. Quantifying post‐release acclimation effects on fitness and behavior is important for maximizing the success of reintroduction programs and for predicting the number of captive‐reared animals required for release. Endangered Blanding's turtles Emydoidea blandingii exhibit low recruitment and may benefit from population reinforcement with captive‐reared, ‘headstarted’ individuals (headstarts). We used 6 years of data to compare survival, growth, habitat use and movement ecology between wild‐hatched juvenile turtles and headstarts reared from eggs rescued from injured females. We found strong evidence of an acclimation effect in headstarts, with lower movement, growth, and survival during the first one to two years post‐release. Following this acclimation period, headstarts had movement, growth and survival similar to wild‐hatched juveniles. Habitat use did not differ between headstarts and wild‐hatched juveniles. We hypothesize that the acclimation period occurred because headstarts were introduced directly into the wild (i.e. ‘hard release’) and that providing additional support before or after release may improve the success of headstarts. Headstarts had a monthly survival probability of 0.89 in the first year post‐release, and 0.98 after the first year post‐release. We estimated that headstarts at our sites have approximately three times higher probability of surviving to 10 years of age, compared to wild‐hatched individuals at other sites. Our results highlight that headstarts should be released into habitat individually rather than in clusters, and highlight the need to investigate whether post‐release mortality of captive‐reared animals could be mitigated by increased acclimation to wild conditions, for example through prerelease periods in outdoor pens.